Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd40P27512 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40P27512 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd40P27512 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.79□□□□□ -0.36
Cd40P27512 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cd40P27512 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.79□□□□□ -0.36
Cd40P27512 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.79□□□□□ -0.36
Cd40P27512 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cd40P27512 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.79□□□□□ -0.36
Cd40P27512 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Cd40P27512 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd40P27512 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.78□□□□□ -0.36
Cd40P27512 Gm13223-201ENSMUST00000118609 747 ntBASIC12.78□□□□□ -0.36
Cd40P27512 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.78□□□□□ -0.36
Cd40P27512 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cd40P27512 Gm3436-201ENSMUST00000179930 840 ntBASIC12.78□□□□□ -0.36
Cd40P27512 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Gm27321-201ENSMUST00000185021 205 ntBASIC12.78□□□□□ -0.36
Cd40P27512 Gm37714-201ENSMUST00000194742 342 ntBASIC12.78□□□□□ -0.36
Cd40P27512 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cd40P27512 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.78□□□□□ -0.36
Cd40P27512 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cd40P27512 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.78□□□□□ -0.36
Cd40P27512 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cd40P27512 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
Cd40P27512 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cd40P27512 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd40P27512 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd40P27512 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd40P27512 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cd40P27512 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cd40P27512 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cd40P27512 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40P27512 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40P27512 Gm15460-201ENSMUST00000118147 391 ntBASIC12.77□□□□□ -0.37
Cd40P27512 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.77□□□□□ -0.37
Cd40P27512 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40P27512 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.77□□□□□ -0.37
Cd40P27512 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.77□□□□□ -0.37
Cd40P27512 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.77□□□□□ -0.37
Cd40P27512 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.77□□□□□ -0.37
Cd40P27512 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cd40P27512 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cd40P27512 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms