Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col8a2P25318 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.81□□□□□ -0.52
Col8a2P25318 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Col8a2P25318 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.8□□□□□ -0.52
Col8a2P25318 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Gm15957-201ENSMUST00000118893 974 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.8□□□□□ -0.52
Col8a2P25318 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.8□□□□□ -0.52
Col8a2P25318 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.8□□□□□ -0.52
Col8a2P25318 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.8□□□□□ -0.52
Col8a2P25318 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Gm20445-201ENSMUST00000061905 565 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.8□□□□□ -0.52
Col8a2P25318 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.8□□□□□ -0.52
Col8a2P25318 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Col8a2P25318 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col8a2P25318 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col8a2P25318 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col8a2P25318 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Gm6912-201ENSMUST00000117218 544 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.79□□□□□ -0.52
Col8a2P25318 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Gm3436-201ENSMUST00000179930 840 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Gm24694-201ENSMUST00000180054 110 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Gm27663-201ENSMUST00000184839 110 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.79□□□□□ -0.52
Col8a2P25318 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Col8a2P25318 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.79□□□□□ -0.52
Col8a2P25318 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.79□□□□□ -0.52
Col8a2P25318 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col8a2P25318 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col8a2P25318 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col8a2P25318 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Col8a2P25318 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms