Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm8927-201ENSMUST00000181978 981 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm27514-201ENSMUST00000183692 110 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm3222-201ENSMUST00000071282 990 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.12■□□□□ 0.01
Aldh1a1P24549 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Aldh1a1P24549 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Gm13689-201ENSMUST00000119360 685 ntBASIC15.11■□□□□ 0.01
Aldh1a1P24549 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Aldh1a1P24549 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.1■□□□□ 0.01
Aldh1a1P24549 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.1■□□□□ 0.01
Aldh1a1P24549 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.1■□□□□ 0.01
Aldh1a1P24549 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.1■□□□□ 0.01
Aldh1a1P24549 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.1■□□□□ 0.01
Aldh1a1P24549 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aldh1a1P24549 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.09■□□□□ 0.01
Aldh1a1P24549 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aldh1a1P24549 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms