Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BdnfP21237 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
BdnfP21237 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BdnfP21237 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BdnfP21237 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
BdnfP21237 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BdnfP21237 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
BdnfP21237 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.56□□□□□ -0.24
BdnfP21237 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
BdnfP21237 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.56□□□□□ -0.24
BdnfP21237 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.56□□□□□ -0.24
BdnfP21237 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.56□□□□□ -0.24
BdnfP21237 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
BdnfP21237 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
BdnfP21237 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
BdnfP21237 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
BdnfP21237 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
BdnfP21237 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.56□□□□□ -0.24
BdnfP21237 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
BdnfP21237 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.56□□□□□ -0.24
BdnfP21237 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.55□□□□□ -0.24
BdnfP21237 Gm44492-201ENSMUST00000197012 141 ntBASIC13.55□□□□□ -0.24
BdnfP21237 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
BdnfP21237 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.55□□□□□ -0.24
BdnfP21237 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.54□□□□□ -0.24
BdnfP21237 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
BdnfP21237 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.54□□□□□ -0.24
BdnfP21237 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.54□□□□□ -0.24
BdnfP21237 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.54□□□□□ -0.24
BdnfP21237 Gm15483-201ENSMUST00000120338 456 ntBASIC13.54□□□□□ -0.24
BdnfP21237 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.54□□□□□ -0.24
BdnfP21237 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.54□□□□□ -0.24
BdnfP21237 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.54□□□□□ -0.24
BdnfP21237 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
BdnfP21237 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms