Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.1□□□□□ -0.15
PdgfaP20033 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.1□□□□□ -0.15
PdgfaP20033 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PdgfaP20033 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Gm20949-201ENSMUST00000206478 952 ntBASIC14.1□□□□□ -0.15
PdgfaP20033 Gm45612-201ENSMUST00000211320 160 ntBASIC14.1□□□□□ -0.15
PdgfaP20033 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.1□□□□□ -0.15
PdgfaP20033 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.1□□□□□ -0.15
PdgfaP20033 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.1□□□□□ -0.15
PdgfaP20033 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfaP20033 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfaP20033 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Grk6-205ENSMUST00000224653 2976 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.09□□□□□ -0.15
PdgfaP20033 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 Gm11745-201ENSMUST00000121669 448 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gm5312-201ENSMUST00000203728 547 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
PdgfaP20033 Gm5186-201ENSMUST00000218781 920 ntBASIC14.09□□□□□ -0.15
PdgfaP20033 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfaP20033 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
PdgfaP20033 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfaP20033 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.08□□□□□ -0.15
PdgfaP20033 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfaP20033 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfaP20033 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfaP20033 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfaP20033 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
PdgfaP20033 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.08□□□□□ -0.16
PdgfaP20033 Gm19164-201ENSMUST00000210667 640 ntBASIC14.08□□□□□ -0.16
PdgfaP20033 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.08□□□□□ -0.16
PdgfaP20033 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms