Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmga1P17095 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmga1P17095 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Hmga1P17095 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmga1P17095 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hmga1P17095 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Hmga1P17095 Gm29741-201ENSMUST00000192667 421 ntBASIC14.38□□□□□ -0.11
Hmga1P17095 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.38□□□□□ -0.11
Hmga1P17095 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Hmga1P17095 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmga1P17095 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hmga1P17095 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmga1P17095 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmga1P17095 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Gm11524-201ENSMUST00000119349 807 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Gm15376-201ENSMUST00000122258 783 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmga1P17095 Gm8584-201ENSMUST00000171982 758 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmga1P17095 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.37□□□□□ -0.11
Hmga1P17095 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmga1P17095 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmga1P17095 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hmga1P17095 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmga1P17095 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga1P17095 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga1P17095 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmga1P17095 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga1P17095 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hmga1P17095 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hmga1P17095 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Gm18187-201ENSMUST00000196476 984 ntBASIC14.36□□□□□ -0.11
Hmga1P17095 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmga1P17095 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmga1P17095 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmga1P17095 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms