Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
RhoP15409 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.24□□□□□ -0.13
RhoP15409 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RhoP15409 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RhoP15409 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.23□□□□□ -0.13
RhoP15409 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RhoP15409 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.23□□□□□ -0.13
RhoP15409 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.23□□□□□ -0.13
RhoP15409 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.23□□□□□ -0.13
RhoP15409 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.23□□□□□ -0.13
RhoP15409 Mir1894-201ENSMUST00000122802 81 ntBASIC14.23□□□□□ -0.13
RhoP15409 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.23□□□□□ -0.13
RhoP15409 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RhoP15409 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.23□□□□□ -0.13
RhoP15409 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RhoP15409 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.23□□□□□ -0.13
RhoP15409 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.23□□□□□ -0.13
RhoP15409 Gm8463-201ENSMUST00000208573 613 ntBASIC14.23□□□□□ -0.13
RhoP15409 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.23□□□□□ -0.13
RhoP15409 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RhoP15409 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RhoP15409 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RhoP15409 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.22□□□□□ -0.13
RhoP15409 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Gm11425-201ENSMUST00000119608 498 ntBASIC14.22□□□□□ -0.13
RhoP15409 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Gm26464-201ENSMUST00000157094 305 ntBASIC14.22□□□□□ -0.13
RhoP15409 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
RhoP15409 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.22□□□□□ -0.13
RhoP15409 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Gm9396-201ENSMUST00000076703 567 ntBASIC14.22□□□□□ -0.13
RhoP15409 Mir497b-201ENSMUST00000093601 125 ntBASIC14.22□□□□□ -0.13
RhoP15409 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.22□□□□□ -0.13
RhoP15409 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.22□□□□□ -0.13
RhoP15409 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RhoP15409 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RhoP15409 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RhoP15409 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
RhoP15409 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RhoP15409 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Gm15429-201ENSMUST00000151268 798 ntBASIC14.21□□□□□ -0.13
RhoP15409 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RhoP15409 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.21□□□□□ -0.13
RhoP15409 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.21□□□□□ -0.13
RhoP15409 Gm17794-201ENSMUST00000220252 955 ntBASIC14.21□□□□□ -0.13
RhoP15409 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms