Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm27663-201ENSMUST00000184839 110 ntBASIC13.57□□□□□ -0.24
Cntn1P12960 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cntn1P12960 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
Cntn1P12960 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.56□□□□□ -0.24
Cntn1P12960 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.56□□□□□ -0.24
Cntn1P12960 Gm20445-201ENSMUST00000061905 565 ntBASIC13.56□□□□□ -0.24
Cntn1P12960 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.56□□□□□ -0.24
Cntn1P12960 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cntn1P12960 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cntn1P12960 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.55□□□□□ -0.24
Cntn1P12960 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.55□□□□□ -0.24
Cntn1P12960 Gm15460-201ENSMUST00000118147 391 ntBASIC13.55□□□□□ -0.24
Cntn1P12960 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Gm9522-201ENSMUST00000182394 926 ntBASIC13.55□□□□□ -0.24
Cntn1P12960 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.55□□□□□ -0.24
Cntn1P12960 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cntn1P12960 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cntn1P12960 Gm6218-201ENSMUST00000219812 628 ntBASIC13.55□□□□□ -0.24
Cntn1P12960 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cntn1P12960 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cntn1P12960 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cntn1P12960 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cntn1P12960 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.54□□□□□ -0.24
Cntn1P12960 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cntn1P12960 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Gm7488-201ENSMUST00000117148 684 ntBASIC13.54□□□□□ -0.24
Cntn1P12960 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cntn1P12960 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cntn1P12960 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms