Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.32□□□□□ -0.44
UbbP0CG49 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.32□□□□□ -0.44
UbbP0CG49 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UbbP0CG49 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.31□□□□□ -0.44
UbbP0CG49 Gm37230-201ENSMUST00000194491 818 ntBASIC12.31□□□□□ -0.44
UbbP0CG49 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
UbbP0CG49 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
UbbP0CG49 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.31□□□□□ -0.44
UbbP0CG49 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UbbP0CG49 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.3□□□□□ -0.44
UbbP0CG49 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.3□□□□□ -0.44
UbbP0CG49 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.3□□□□□ -0.44
UbbP0CG49 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.3□□□□□ -0.44
UbbP0CG49 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.3□□□□□ -0.44
UbbP0CG49 Gm18041-201ENSMUST00000218210 618 ntBASIC12.3□□□□□ -0.44
UbbP0CG49 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.3□□□□□ -0.44
UbbP0CG49 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UbbP0CG49 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
UbbP0CG49 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UbbP0CG49 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.29□□□□□ -0.44
UbbP0CG49 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UbbP0CG49 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.29□□□□□ -0.44
UbbP0CG49 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UbbP0CG49 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UbbP0CG49 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UbbP0CG49 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms