Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm6415-201ENSMUST00000118488 348 ntBASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Mir6956-201ENSMUST00000183598 62 ntBASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp6P0C0A3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp6P0C0A3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chmp6P0C0A3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Chmp6P0C0A3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp6P0C0A3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms