Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Gm10478-201ENSMUST00000084451 396 ntBASIC18.19■□□□□ 0.5
Hoxc9P09633 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hoxc9P09633 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.19■□□□□ 0.5
Hoxc9P09633 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.18■□□□□ 0.5
Hoxc9P09633 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Gm24644-201ENSMUST00000157114 139 ntBASIC18.18■□□□□ 0.5
Hoxc9P09633 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.18■□□□□ 0.5
Hoxc9P09633 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.18■□□□□ 0.5
Hoxc9P09633 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hoxc9P09633 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.17■□□□□ 0.5
Hoxc9P09633 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Gm17420-201ENSMUST00000164753 153 ntBASIC18.17■□□□□ 0.5
Hoxc9P09633 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hoxc9P09633 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hoxc9P09633 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Hoxc9P09633 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.16■□□□□ 0.5
Hoxc9P09633 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hoxc9P09633 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Hoxc9P09633 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.16■□□□□ 0.5
Hoxc9P09633 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Hoxc9P09633 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.16■□□□□ 0.5
Hoxc9P09633 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
Hoxc9P09633 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hoxc9P09633 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.15■□□□□ 0.5
Hoxc9P09633 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Proscos-202ENSMUST00000178990 666 ntBASIC18.15■□□□□ 0.5
Hoxc9P09633 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms