Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TnfP06804 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.97□□□□□ -0.01
TnfP06804 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TnfP06804 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.97□□□□□ -0.01
TnfP06804 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.97□□□□□ -0.01
TnfP06804 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.97□□□□□ -0.01
TnfP06804 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.97□□□□□ -0.01
TnfP06804 Gm19220-201ENSMUST00000222682 803 ntBASIC14.97□□□□□ -0.01
TnfP06804 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.97□□□□□ -0.01
TnfP06804 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TnfP06804 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
TnfP06804 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
TnfP06804 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TnfP06804 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TnfP06804 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TnfP06804 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TnfP06804 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TnfP06804 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TnfP06804 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
TnfP06804 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TnfP06804 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.96□□□□□ -0.01
TnfP06804 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.96□□□□□ -0.01
TnfP06804 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Gm5354-201ENSMUST00000182417 973 ntBASIC14.96□□□□□ -0.01
TnfP06804 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Gm5279-201ENSMUST00000199575 745 ntBASIC14.96□□□□□ -0.01
TnfP06804 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TnfP06804 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TnfP06804 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TnfP06804 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TnfP06804 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.95□□□□□ -0.02
TnfP06804 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.95□□□□□ -0.02
TnfP06804 Gm9908-201ENSMUST00000211534 448 ntBASIC14.95□□□□□ -0.02
TnfP06804 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.95□□□□□ -0.02
TnfP06804 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TnfP06804 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TnfP06804 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TnfP06804 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 150.3 ms