Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
P06344 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
P06344 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
P06344 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.61□□□□□ -0.39
P06344 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06344 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
P06344 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.6□□□□□ -0.39
P06344 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.6□□□□□ -0.39
P06344 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Gm4875-201ENSMUST00000118257 786 ntBASIC12.6□□□□□ -0.39
P06344 Gm12882-201ENSMUST00000121696 517 ntBASIC12.6□□□□□ -0.39
P06344 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.6□□□□□ -0.39
P06344 Gm27437-201ENSMUST00000183429 107 ntBASIC12.6□□□□□ -0.39
P06344 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.6□□□□□ -0.39
P06344 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.6□□□□□ -0.39
P06344 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.6□□□□□ -0.39
P06344 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.6□□□□□ -0.39
P06344 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.6□□□□□ -0.39
P06344 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.6□□□□□ -0.39
P06344 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P06344 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.6□□□□□ -0.39
P06344 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
P06344 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06344 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P06344 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P06344 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P06344 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.59□□□□□ -0.39
P06344 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P06344 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.59□□□□□ -0.39
P06344 Gm14719-201ENSMUST00000121891 340 ntBASIC12.59□□□□□ -0.39
P06344 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.59□□□□□ -0.39
P06344 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Gm27838-201ENSMUST00000184829 128 ntBASIC12.59□□□□□ -0.39
P06344 Gm7063-201ENSMUST00000186840 981 ntBASIC12.59□□□□□ -0.39
P06344 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.59□□□□□ -0.39
P06344 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.59□□□□□ -0.39
P06344 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P06344 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.59□□□□□ -0.39
P06344 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P06344 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.59□□□□□ -0.39
P06344 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06344 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
P06344 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
P06344 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms