Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P04224 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.42□□□□□ -0.42
P04224 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P04224 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P04224 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P04224 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.41□□□□□ -0.42
P04224 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
P04224 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P04224 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.41□□□□□ -0.42
P04224 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.41□□□□□ -0.42
P04224 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.41□□□□□ -0.42
P04224 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
P04224 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.41□□□□□ -0.42
P04224 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P04224 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
P04224 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.4□□□□□ -0.42
P04224 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P04224 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.4□□□□□ -0.42
P04224 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.4□□□□□ -0.42
P04224 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.4□□□□□ -0.42
P04224 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.4□□□□□ -0.42
P04224 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
P04224 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.4□□□□□ -0.42
P04224 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.4□□□□□ -0.42
P04224 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P04224 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P04224 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P04224 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
P04224 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.4□□□□□ -0.43
P04224 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
P04224 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P04224 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms