Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxa3P02831 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxa3P02831 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm43703-201ENSMUST00000200523 763 ntBASIC11.87□□□□□ -0.51
Hoxa3P02831 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm9182-201ENSMUST00000217829 639 ntBASIC11.87□□□□□ -0.51
Hoxa3P02831 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.87□□□□□ -0.51
Hoxa3P02831 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.86□□□□□ -0.51
Hoxa3P02831 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.86□□□□□ -0.51
Hoxa3P02831 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Gm5866-201ENSMUST00000177881 973 ntBASIC11.86□□□□□ -0.51
Hoxa3P02831 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Gm45453-201ENSMUST00000211758 853 ntBASIC11.86□□□□□ -0.51
Hoxa3P02831 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxa3P02831 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxa3P02831 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.85□□□□□ -0.51
Hoxa3P02831 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.85□□□□□ -0.51
Hoxa3P02831 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.85□□□□□ -0.51
Hoxa3P02831 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxa3P02831 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms