Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Igh-VJ558P01758 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Mir449b-201ENSMUST00000104833 80 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Gm27702-201ENSMUST00000184512 56 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Igh-VJ558P01758 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Gm24543-201ENSMUST00000103867 82 ntBASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Gm8396-201ENSMUST00000057361 823 ntBASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Igh-VJ558P01758 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igh-VJ558P01758 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igh-VJ558P01758 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Igh-VJ558P01758 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Igh-VJ558P01758 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Igh-VJ558P01758 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igh-VJ558P01758 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igh-VJ558P01758 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Igh-VJ558P01758 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms