Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.25■□□□□ 0.03
Vti1aO89116 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vti1aO89116 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.25■□□□□ 0.03
Vti1aO89116 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vti1aO89116 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.25■□□□□ 0.03
Vti1aO89116 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.25■□□□□ 0.03
Vti1aO89116 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.25■□□□□ 0.03
Vti1aO89116 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vti1aO89116 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vti1aO89116 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.24■□□□□ 0.03
Vti1aO89116 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.24■□□□□ 0.03
Vti1aO89116 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.24■□□□□ 0.03
Vti1aO89116 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm8515-201ENSMUST00000194852 576 ntBASIC15.24■□□□□ 0.03
Vti1aO89116 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vti1aO89116 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vti1aO89116 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vti1aO89116 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.24■□□□□ 0.03
Vti1aO89116 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vti1aO89116 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.24■□□□□ 0.03
Vti1aO89116 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.23■□□□□ 0.03
Vti1aO89116 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vti1aO89116 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vti1aO89116 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.23■□□□□ 0.03
Vti1aO89116 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vti1aO89116 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vti1aO89116 Gm11478-201ENSMUST00000117851 599 ntBASIC15.23■□□□□ 0.03
Vti1aO89116 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Gm45384-201ENSMUST00000210451 277 ntBASIC15.23■□□□□ 0.03
Vti1aO89116 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.23■□□□□ 0.03
Vti1aO89116 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vti1aO89116 Mir125a-201ENSMUST00000083545 68 ntBASIC15.23■□□□□ 0.03
Vti1aO89116 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vti1aO89116 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vti1aO89116 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vti1aO89116 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.23■□□□□ 0.03
Vti1aO89116 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vti1aO89116 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vti1aO89116 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vti1aO89116 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vti1aO89116 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vti1aO89116 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vti1aO89116 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms