Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hcn1O88704 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Gm13464-201ENSMUST00000119418 935 ntBASIC13.56□□□□□ -0.24
Hcn1O88704 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.56□□□□□ -0.24
Hcn1O88704 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.56□□□□□ -0.24
Hcn1O88704 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hcn1O88704 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hcn1O88704 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.55□□□□□ -0.24
Hcn1O88704 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hcn1O88704 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.55□□□□□ -0.24
Hcn1O88704 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.55□□□□□ -0.24
Hcn1O88704 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.55□□□□□ -0.24
Hcn1O88704 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.55□□□□□ -0.24
Hcn1O88704 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.55□□□□□ -0.24
Hcn1O88704 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.55□□□□□ -0.24
Hcn1O88704 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.55□□□□□ -0.24
Hcn1O88704 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Hcn1O88704 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Hcn1O88704 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hcn1O88704 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hcn1O88704 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.54□□□□□ -0.24
Hcn1O88704 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.54□□□□□ -0.24
Hcn1O88704 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.54□□□□□ -0.24
Hcn1O88704 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.54□□□□□ -0.24
Hcn1O88704 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hcn1O88704 Gm25287-201ENSMUST00000103846 110 ntBASIC13.54□□□□□ -0.24
Hcn1O88704 Gm22918-201ENSMUST00000103855 110 ntBASIC13.54□□□□□ -0.24
Hcn1O88704 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.54□□□□□ -0.24
Hcn1O88704 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.54□□□□□ -0.24
Hcn1O88704 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.54□□□□□ -0.24
Hcn1O88704 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.54□□□□□ -0.24
Hcn1O88704 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms