Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Gm18246-201ENSMUST00000221023 728 ntBASIC13.06□□□□□ -0.32
Cops4O88544 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cops4O88544 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cops4O88544 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.06□□□□□ -0.32
Cops4O88544 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.06□□□□□ -0.32
Cops4O88544 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cops4O88544 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.05□□□□□ -0.32
Cops4O88544 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.05□□□□□ -0.32
Cops4O88544 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.05□□□□□ -0.32
Cops4O88544 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.05□□□□□ -0.32
Cops4O88544 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.05□□□□□ -0.32
Cops4O88544 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cops4O88544 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cops4O88544 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.04□□□□□ -0.32
Cops4O88544 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Gm4899-201ENSMUST00000178708 719 ntBASIC13.04□□□□□ -0.32
Cops4O88544 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.04□□□□□ -0.32
Cops4O88544 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.04□□□□□ -0.32
Cops4O88544 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cops4O88544 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.04□□□□□ -0.32
Cops4O88544 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cops4O88544 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Cops4O88544 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms