Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf13O54965 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf13O54965 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.83□□□□□ -0.36
Rnf13O54965 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rnf13O54965 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.83□□□□□ -0.36
Rnf13O54965 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.83□□□□□ -0.36
Rnf13O54965 Gm45747-201ENSMUST00000212203 999 ntBASIC12.83□□□□□ -0.36
Rnf13O54965 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.83□□□□□ -0.36
Rnf13O54965 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rnf13O54965 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf13O54965 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf13O54965 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.82□□□□□ -0.36
Rnf13O54965 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Rnf13O54965 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf13O54965 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.82□□□□□ -0.36
Rnf13O54965 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf13O54965 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf13O54965 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf13O54965 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf13O54965 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf13O54965 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Gm5479-201ENSMUST00000160578 435 ntBASIC12.81□□□□□ -0.36
Rnf13O54965 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.81□□□□□ -0.36
Rnf13O54965 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rnf13O54965 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf13O54965 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf13O54965 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Rnf13O54965 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf13O54965 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms