Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Limk2O54785 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Limk2O54785 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.36□□□□□ -0.11
Limk2O54785 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.36□□□□□ -0.11
Limk2O54785 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.36□□□□□ -0.11
Limk2O54785 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Limk2O54785 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Limk2O54785 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Gm8584-201ENSMUST00000171982 758 ntBASIC14.35□□□□□ -0.11
Limk2O54785 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.35□□□□□ -0.11
Limk2O54785 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Gm7653-201ENSMUST00000214567 508 ntBASIC14.35□□□□□ -0.11
Limk2O54785 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.35□□□□□ -0.11
Limk2O54785 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Limk2O54785 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Limk2O54785 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.35□□□□□ -0.11
Limk2O54785 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Limk2O54785 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Limk2O54785 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Limk2O54785 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Limk2O54785 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Limk2O54785 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.34□□□□□ -0.11
Limk2O54785 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Limk2O54785 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.34□□□□□ -0.11
Limk2O54785 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.34□□□□□ -0.11
Limk2O54785 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Limk2O54785 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Limk2O54785 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Limk2O54785 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Limk2O54785 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Limk2O54785 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Limk2O54785 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Limk2O54785 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Limk2O54785 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.33□□□□□ -0.11
Limk2O54785 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Limk2O54785 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Gm14127-201ENSMUST00000117906 678 ntBASIC14.33□□□□□ -0.12
Limk2O54785 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.33□□□□□ -0.12
Limk2O54785 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.33□□□□□ -0.12
Limk2O54785 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.33□□□□□ -0.12
Limk2O54785 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.33□□□□□ -0.12
Limk2O54785 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Limk2O54785 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.33□□□□□ -0.12
Limk2O54785 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms