Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.29■□□□□ 0.04
Per1O35973 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.29■□□□□ 0.04
Per1O35973 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.29■□□□□ 0.04
Per1O35973 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Per1O35973 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Per1O35973 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Per1O35973 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per1O35973 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.28■□□□□ 0.04
Per1O35973 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.28■□□□□ 0.04
Per1O35973 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Per1O35973 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.28■□□□□ 0.04
Per1O35973 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.28■□□□□ 0.04
Per1O35973 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.28■□□□□ 0.04
Per1O35973 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Per1O35973 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.28■□□□□ 0.04
Per1O35973 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Per1O35973 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Per1O35973 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.27■□□□□ 0.04
Per1O35973 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Per1O35973 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Per1O35973 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Per1O35973 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.27■□□□□ 0.04
Per1O35973 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Per1O35973 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.27■□□□□ 0.04
Per1O35973 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.27■□□□□ 0.04
Per1O35973 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Gm2445-201ENSMUST00000182798 989 ntBASIC15.27■□□□□ 0.04
Per1O35973 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.27■□□□□ 0.04
Per1O35973 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.27■□□□□ 0.04
Per1O35973 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Per1O35973 Gm15823-201ENSMUST00000064305 670 ntBASIC15.27■□□□□ 0.04
Per1O35973 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Per1O35973 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.27■□□□□ 0.03
Per1O35973 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Per1O35973 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Per1O35973 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Per1O35973 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Per1O35973 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Gm27772-201ENSMUST00000184900 187 ntBASIC15.26■□□□□ 0.03
Per1O35973 Gm37917-201ENSMUST00000194711 392 ntBASIC15.26■□□□□ 0.03
Per1O35973 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.26■□□□□ 0.03
Per1O35973 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.26■□□□□ 0.03
Per1O35973 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Per1O35973 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms