Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clk2O35491 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clk2O35491 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.32■□□□□ 0.04
Clk2O35491 Gm9908-201ENSMUST00000211534 448 ntBASIC15.32■□□□□ 0.04
Clk2O35491 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.32■□□□□ 0.04
Clk2O35491 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clk2O35491 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.32■□□□□ 0.04
Clk2O35491 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Clk2O35491 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clk2O35491 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clk2O35491 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Gm12341-201ENSMUST00000119724 503 ntBASIC15.31■□□□□ 0.04
Clk2O35491 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.31■□□□□ 0.04
Clk2O35491 Gm12091-201ENSMUST00000146791 830 ntBASIC15.31■□□□□ 0.04
Clk2O35491 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.31■□□□□ 0.04
Clk2O35491 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.31■□□□□ 0.04
Clk2O35491 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.31■□□□□ 0.04
Clk2O35491 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Clk2O35491 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Clk2O35491 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Clk2O35491 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.31■□□□□ 0.04
Clk2O35491 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clk2O35491 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.31■□□□□ 0.04
Clk2O35491 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clk2O35491 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Clk2O35491 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.3■□□□□ 0.04
Clk2O35491 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Clk2O35491 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.3■□□□□ 0.04
Clk2O35491 Gm12138-201ENSMUST00000122180 951 ntBASIC15.3■□□□□ 0.04
Clk2O35491 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.3■□□□□ 0.04
Clk2O35491 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Clk2O35491 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Clk2O35491 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clk2O35491 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.3■□□□□ 0.04
Clk2O35491 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clk2O35491 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.29■□□□□ 0.04
Clk2O35491 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Gm24420-201ENSMUST00000176676 59 ntBASIC15.29■□□□□ 0.04
Clk2O35491 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.29■□□□□ 0.04
Clk2O35491 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clk2O35491 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.29■□□□□ 0.04
Clk2O35491 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.29■□□□□ 0.04
Clk2O35491 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clk2O35491 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms