Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Gm25927-201ENSMUST00000175058 117 ntBASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tubgcp6G5E8P0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Gm3756-201ENSMUST00000169182 1355 ntBASIC19.26■□□□□ 0.67
Tubgcp6G5E8P0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tubgcp6G5E8P0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm29608-201ENSMUST00000190444 463 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm24255-201ENSMUST00000104481 128 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 CT030704.2-201ENSMUST00000228887 494 ntBASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tubgcp6G5E8P0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp6G5E8P0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp6G5E8P0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp6G5E8P0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp6G5E8P0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tubgcp6G5E8P0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms