Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm13369-201ENSMUST00000119442 987 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm25261-201ENSMUST00000157416 134 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Mir3547-201ENSMUST00000175461 88 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm29396-201ENSMUST00000185659 716 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm17330-201ENSMUST00000221047 165 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Gm26315-201ENSMUST00000083890 321 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.25□□□□□ -0.29
Colca2F8VPY8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Colca2F8VPY8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Mir686-201ENSMUST00000102174 109 ntBASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm22323-201ENSMUST00000103832 109 ntBASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm13786-201ENSMUST00000122371 333 ntBASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.24□□□□□ -0.29
Colca2F8VPY8 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.24□□□□□ -0.29
Colca2F8VPY8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Colca2F8VPY8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Colca2F8VPY8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.23□□□□□ -0.29
Colca2F8VPY8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Colca2F8VPY8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms