Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh1F7BJK1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Gm5177-201ENSMUST00000183092 997 ntBASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh1F7BJK1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Gm12350-201ENSMUST00000121208 462 ntBASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Grk6-205ENSMUST00000224653 2976 ntBASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh1F7BJK1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh1F7BJK1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms