Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.9■□□□□ 0.3
Ube4aE9Q735 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.9■□□□□ 0.3
Ube4aE9Q735 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.9■□□□□ 0.3
Ube4aE9Q735 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube4aE9Q735 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.89■□□□□ 0.3
Ube4aE9Q735 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.89■□□□□ 0.3
Ube4aE9Q735 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm11425-201ENSMUST00000119608 498 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm27839-201ENSMUST00000184242 106 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Gm9396-201ENSMUST00000076703 567 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube4aE9Q735 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ube4aE9Q735 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.89■□□□□ 0.29
Ube4aE9Q735 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm12390-201ENSMUST00000117897 397 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm6983-201ENSMUST00000214912 628 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.88■□□□□ 0.29
Ube4aE9Q735 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube4aE9Q735 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.87■□□□□ 0.29
Ube4aE9Q735 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.87■□□□□ 0.29
Ube4aE9Q735 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm11814-201ENSMUST00000119515 929 ntBASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm27486-201ENSMUST00000184923 80 ntBASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 AY702102-202ENSMUST00000194651 1173 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms