Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 AC132384.14-201ENSMUST00000219346 1147 ntBASIC8.42□□□□□ -1.06
ApobE9Q414 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.42□□□□□ -1.06
ApobE9Q414 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ApobE9Q414 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ApobE9Q414 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ApobE9Q414 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm44645-201ENSMUST00000205492 1653 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 CT573086.1-201ENSMUST00000227202 1074 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
ApobE9Q414 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
ApobE9Q414 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm5523-201ENSMUST00000180415 997 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Gm3890-201ENSMUST00000182416 207 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm43579-201ENSMUST00000202387 1307 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC8.41□□□□□ -1.06
ApobE9Q414 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm7046-201ENSMUST00000221351 977 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
ApobE9Q414 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm37297-201ENSMUST00000192974 2384 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 Gm4819-201ENSMUST00000182170 1009 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 CT025533.2-201ENSMUST00000228715 1248 ntBASIC8.41□□□□□ -1.06
ApobE9Q414 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ApobE9Q414 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
ApobE9Q414 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
ApobE9Q414 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
ApobE9Q414 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
ApobE9Q414 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
ApobE9Q414 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Gm45504-201ENSMUST00000211407 2107 ntBASIC8.4□□□□□ -1.06
ApobE9Q414 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC8.4□□□□□ -1.06
ApobE9Q414 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC8.4□□□□□ -1.06
ApobE9Q414 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.4□□□□□ -1.06
ApobE9Q414 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
ApobE9Q414 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
ApobE9Q414 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms