Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm5878E9PUB3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm11025-201ENSMUST00000140773 466 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Mir3113-201ENSMUST00000175478 76 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 AA619741-201ENSMUST00000195095 646 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm45574-201ENSMUST00000210921 331 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.66□□□□□ -0.7
Gm5878E9PUB3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gm5878E9PUB3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Nudt18-203ENSMUST00000228768 1578 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm17271-201ENSMUST00000165535 355 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm28064-201ENSMUST00000185639 858 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm38225-201ENSMUST00000194001 393 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm5364-201ENSMUST00000216789 889 ntBASIC10.65□□□□□ -0.7
Gm5878E9PUB3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm5878E9PUB3 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms