Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm12887B1AVM1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm13418-201ENSMUST00000119097 944 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm9182-201ENSMUST00000217829 639 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm12887B1AVM1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm12887B1AVM1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm12887B1AVM1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms