Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd6A3KFM7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.32□□□□□ -0.6
Chd6A3KFM7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.32□□□□□ -0.6
Chd6A3KFM7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC11.32□□□□□ -0.6
Chd6A3KFM7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Chd6A3KFM7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gm9211-201ENSMUST00000182882 975 ntBASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.31□□□□□ -0.6
Chd6A3KFM7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.31□□□□□ -0.6
Chd6A3KFM7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd6A3KFM7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Gm12948-201ENSMUST00000119406 682 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Gm7666-201ENSMUST00000146631 819 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Gm21470-201ENSMUST00000187680 696 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.3□□□□□ -0.6
Chd6A3KFM7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chd6A3KFM7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms