Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm7287-201ENSMUST00000205267 602 ntBASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm7561-201ENSMUST00000211203 886 ntBASIC11.91□□□□□ -0.5
Col6a4A2AX52 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a4A2AX52 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a4A2AX52 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.9□□□□□ -0.5
Col6a4A2AX52 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a4A2AX52 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.9□□□□□ -0.5
Col6a4A2AX52 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.9□□□□□ -0.5
Col6a4A2AX52 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.9□□□□□ -0.5
Col6a4A2AX52 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a4A2AX52 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a4A2AX52 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a4A2AX52 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a4A2AX52 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a4A2AX52 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm24196-201ENSMUST00000179161 110 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm3786-201ENSMUST00000202659 378 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm7399-201ENSMUST00000032395 858 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms