Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm44608-201ENSMUST00000206827 855 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Psmb5-202ENSMUST00000227257 622 ntBASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12-1A0N8R1 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Gm15427-201ENSMUST00000117288 531 ntBASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12-1A0N8R1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms