Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc112A0AUP1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.14■□□□□ 0.18
Ccdc112A0AUP1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Gm11025-201ENSMUST00000140773 466 ntBASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc112A0AUP1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc112A0AUP1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gm12260-201ENSMUST00000122447 411 ntBASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc112A0AUP1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm2810-201ENSMUST00000118681 990 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm15957-201ENSMUST00000118893 974 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm17271-201ENSMUST00000165535 355 ntBASIC16.11■□□□□ 0.17
Ccdc112A0AUP1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms