Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc194A0A140LIT1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc194A0A140LIT1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc194A0A140LIT1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms