Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav6n-6A0A075B6B2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm1401-201ENSMUST00000122048 772 ntBASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm43514-201ENSMUST00000198852 424 ntBASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm18206-201ENSMUST00000207027 926 ntBASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav6n-6A0A075B6B2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm27628-201ENSMUST00000184911 107 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Psmb5-202ENSMUST00000227257 622 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Grk6-207ENSMUST00000225925 2769 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav6n-6A0A075B6B2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav6n-6A0A075B6B2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms