Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav18A0A075B656 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.59□□□□□ -0.55
Trav18A0A075B656 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm1401-201ENSMUST00000122048 772 ntBASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm12260-201ENSMUST00000122447 411 ntBASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.59□□□□□ -0.55
Trav18A0A075B656 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav18A0A075B656 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav18A0A075B656 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.58□□□□□ -0.56
Trav18A0A075B656 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.58□□□□□ -0.56
Trav18A0A075B656 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav18A0A075B656 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.58□□□□□ -0.56
Trav18A0A075B656 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Gm11543-201ENSMUST00000120758 370 ntBASIC11.57□□□□□ -0.56
Trav18A0A075B656 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Gm27741-201ENSMUST00000185060 237 ntBASIC11.57□□□□□ -0.56
Trav18A0A075B656 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.57□□□□□ -0.56
Trav18A0A075B656 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav18A0A075B656 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
Trav18A0A075B656 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms