Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Gm15483-201ENSMUST00000120338 456 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Gm11543-201ENSMUST00000120758 370 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Gm9727-201ENSMUST00000161387 555 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb3S4R1G7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm27920-201ENSMUST00000183953 96 ntBASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Mir8117-201ENSMUST00000184773 107 ntBASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm17968-201ENSMUST00000194902 784 ntBASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb3S4R1G7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm1401-201ENSMUST00000122048 772 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm17271-201ENSMUST00000165535 355 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm44492-201ENSMUST00000197012 141 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm7461-201ENSMUST00000058918 827 ntBASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms