Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cx3cr1Q9Z0D9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm15173-201ENSMUST00000122049 433 ntBASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm16026-204ENSMUST00000162652 683 ntBASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm37230-201ENSMUST00000194491 818 ntBASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm45098-201ENSMUST00000207179 657 ntBASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cx3cr1Q9Z0D9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cx3cr1Q9Z0D9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms