Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
ClcnkaQ9WUB7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm25287-201ENSMUST00000103846 110 ntBASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm22918-201ENSMUST00000103855 110 ntBASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClcnkaQ9WUB7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.05□□□□□ -0.32
ClcnkaQ9WUB7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm26308-201ENSMUST00000157768 69 ntBASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm9824-201ENSMUST00000178707 561 ntBASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClcnkaQ9WUB7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms