Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Gm17837-201ENSMUST00000186435 985 ntBASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clcf1Q9QZM3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm27306-201ENSMUST00000183970 107 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm37230-201ENSMUST00000194491 818 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gm6888-201ENSMUST00000221983 706 ntBASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clcf1Q9QZM3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm5566-201ENSMUST00000116118 459 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm29310-201ENSMUST00000185468 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21825-201ENSMUST00000185728 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm29109-201ENSMUST00000185895 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21896-201ENSMUST00000186520 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21873-201ENSMUST00000186728 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21794-201ENSMUST00000187056 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21880-201ENSMUST00000187275 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21826-201ENSMUST00000187451 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21198-201ENSMUST00000188393 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21749-201ENSMUST00000189343 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21901-201ENSMUST00000189568 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm29424-201ENSMUST00000189716 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm28599-201ENSMUST00000189838 694 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21867-201ENSMUST00000189917 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm29269-201ENSMUST00000190087 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm21722-201ENSMUST00000190153 696 ntBASIC12.86□□□□□ -0.35
Clcf1Q9QZM3 Gm28423-201ENSMUST00000190701 696 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms