Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm18206-201ENSMUST00000207027 926 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl28Q9JIL2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccl28Q9JIL2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Gm27920-201ENSMUST00000183953 96 ntBASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccl28Q9JIL2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms