Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Gm27430-201ENSMUST00000184585 107 ntBASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Gm44333-201ENSMUST00000197168 107 ntBASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubb3Q9ERD7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Gm2810-201ENSMUST00000118681 990 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Gm15483-201ENSMUST00000120338 456 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Gm14057-201ENSMUST00000120631 482 ntBASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubb3Q9ERD7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.06□□□□□ -0.16
Tubb3Q9ERD7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms