Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sf3a3Q9D554 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3a3Q9D554 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sf3a3Q9D554 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3a3Q9D554 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3a3Q9D554 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3a3Q9D554 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3a3Q9D554 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sf3a3Q9D554 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sf3a3Q9D554 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms