Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim13Q9CYB0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.09□□□□□ -0.31
Trim13Q9CYB0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm2451-201ENSMUST00000199447 999 ntBASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim13Q9CYB0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim13Q9CYB0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gm4899-201ENSMUST00000178708 719 ntBASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim13Q9CYB0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.07□□□□□ -0.32
Trim13Q9CYB0 Mir8098-201ENSMUST00000184011 137 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms