Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.06□□□□□ -0.16
Ssu72Q9CY97 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.06□□□□□ -0.16
Ssu72Q9CY97 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Gm5177-201ENSMUST00000183092 997 ntBASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Gm27301-201ENSMUST00000184012 127 ntBASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.05□□□□□ -0.16
Ssu72Q9CY97 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssu72Q9CY97 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssu72Q9CY97 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms