Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Gm45784-201ENSMUST00000188360 142 ntBASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Mir497b-201ENSMUST00000093601 125 ntBASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nip7Q9CXK8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm27847-201ENSMUST00000183711 107 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm27375-201ENSMUST00000183799 107 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm27772-201ENSMUST00000184900 187 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm6091-201ENSMUST00000098307 165 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nip7Q9CXK8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm13392-201ENSMUST00000117708 150 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm12485-201ENSMUST00000119641 291 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm14660-201ENSMUST00000119809 575 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nip7Q9CXK8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nip7Q9CXK8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Gm8062-201ENSMUST00000139696 444 ntBASIC17.51■□□□□ 0.39
Nip7Q9CXK8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms