Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Gm5643-201ENSMUST00000117081 966 ntBASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Gm26039-201ENSMUST00000158152 144 ntBASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn1Q9CWM4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Grk6-207ENSMUST00000225925 2769 ntBASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.4□□□□□ -0.42
Pfdn1Q9CWM4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.4□□□□□ -0.43
Pfdn1Q9CWM4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pfdn1Q9CWM4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Gm19164-201ENSMUST00000210667 640 ntBASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pfdn1Q9CWM4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms