Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rpa3Q9CQ71 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gm15957-201ENSMUST00000118893 974 ntBASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rpa3Q9CQ71 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 BC001981-202ENSMUST00000191393 1545 ntBASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpa3Q9CQ71 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms