Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Rprl2-201ENSMUST00000157150 290 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.87□□□□□ -0.19
Trim16Q99PP9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim16Q99PP9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.86□□□□□ -0.19
Trim16Q99PP9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.86□□□□□ -0.19
Trim16Q99PP9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trim16Q99PP9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim16Q99PP9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim16Q99PP9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim16Q99PP9 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.85□□□□□ -0.19
Trim16Q99PP9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim16Q99PP9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms